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PAZAR Documentation
Data formats » ChIP-Seq Peak format
PAZAR ChIP-Seq Peak FormatOverviewThe PAZAR ChIP-Seq Peak format is for users who are only interested in ChIP-Seq peak data. It captures (TF) peak information into a tab delimited format that is easy to work with. Structure of formatFields are: <chromosome> <peak start coordinate> <peak end coordinate> <peak max coordinate> <PAZAR sequence ID> <score> <score type> <PAZAR TF ID> <TF Name> <species> <PMID> <cell or tissue> Those 12 fields are tab-delimited. * The score type can also be thought of as the units of the score * The peak max coordinate refers to the coordinate at which the peak is at its maximum height Examplechr1 915920 916350 916127 RS0167109 195.45 MAXHEIGHT TF0001043 MITF_HUMAN Homo sapiens 21258399 Human 501Mel cells
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