TF - Target Gene File Downloads

For each public project, a dump of the TFs and genes regulated by them is generated every week if new data has been added since the last dump. The resulting (tab-delimited) CSV files are available below.

* note: if an empty file was generated, it means that the project does not contain a TF, or the TF(s) have no specific binding sites. In jaspar_core, for example, Jaspar motifs do not bind to a specific location because they are merely computational predictions.

Project name File Last saved
ABS pazar_ABS_20120522.csv 20120522
AP2g_E2_tan pazar_AP2g_E2_tan_20120522.csv 20120522
AP2g_tan pazar_AP2g_tan_20120522.csv 20120522
AREs pazar_AREs_20120522.csv 20120522
Atoh1_Klisch pazar_Atoh1_Klisch_20120522.csv 20120522
BACH1_ pazar_BACH1__20120522.csv 20120522
BRG1_cd34_cui pazar_BRG1_cd34_cui_20120522.csv 20120522
BRG1_cd36_cui pazar_BRG1_cd36_cui_20120522.csv 20120522
CEBPA_HEPG2_Schmidt pazar_CEBPA_HEPG2_Schmidt_20120522.csv 20120522
CEBPA_Schmidt pazar_CEBPA_Schmidt_20120522.csv 20120522
CTCF_Cui pazar_CTCF_Cui_20120522.csv 20120522
CTCF_HEPG2_Schmidt pazar_CTCF_HEPG2_Schmidt_20120522.csv 20120522
CanEuCre_MaxiPromoter_ pazar_CanEuCre_MaxiPromoter__20120522.csv 20120522
Cao pazar_Cao_20120522.csv 20120522
Cdx2_Nishiyama pazar_Cdx2_Nishiyama_20120522.csv 20120522
Diabetes pazar_Diabetes_20120522.csv 20120522
E2F4_Lee pazar_E2F4_Lee_20120522.csv 20120522
EGR1_Tang pazar_EGR1_Tang_20120522.csv 20120522
EPAS1_schodel pazar_EPAS1_schodel_20120522.csv 20120522
ERalpha1_Stender pazar_ERalpha1_Stender_20120522.csv 20120522
ESR1_Cicatiello pazar_ESR1_Cicatiello_20120522.csv 20120522
ESR1_Grober_2011 pazar_ESR1_Grober_2011_20120522.csv 20120522
ESR2_Grober pazar_ESR2_Grober_20120522.csv 20120522
ETS1_Hollenhorst pazar_ETS1_Hollenhorst_20120522.csv 20120522
Ebf1_Treiber pazar_Ebf1_Treiber_20120522.csv 20120522
Ezh2_Peng pazar_Ezh2_Peng_20120522.csv 20120522
FOXA1_tan pazar_FOXA1_tan_20120522.csv 20120522
Fos_Raha pazar_Fos_Raha_20120522.csv 20120522
FoxA1_E2_tan pazar_FoxA1_E2_tan_20120522.csv 20120522
GATA1_Yu pazar_GATA1_Yu_20120522.csv 20120522
GATA2_Bresnick pazar_GATA2_Bresnick_20120522.csv 20120522
GATA3_untreated_Liu pazar_GATA3_untreated_Liu_20120522.csv 20120522
HIF1A_Xia pazar_HIF1A_Xia_20120522.csv 20120522
HIF1A_schodel pazar_HIF1A_schodel_20120522.csv 20120522
HIF1_TFBS pazar_HIF1_TFBS_20120522.csv 20120522
HNF4A_HEPG2_Schmidt pazar_HNF4A_HEPG2_Schmidt_20120522.csv 20120522
HNF4A_Mizutani pazar_HNF4A_Mizutani_20120522.csv 20120522
HNF4A_stimulated_Mizutani pazar_HNF4A_stimulated_Mizutani_20120522.csv 20120522
HNF4 pazar_HNF4_20120522.csv 20120522
IGF1R_Sehat pazar_IGF1R_Sehat_20120522.csv 20120522
Jarid2_Peng pazar_Jarid2_Peng_20120522.csv 20120522
KLF1_Tallack pazar_KLF1_Tallack_20120522.csv 20120522
MITF_Strub pazar_MITF_Strub_20120522.csv 20120522
MUC5AC pazar_MUC5AC_20120522.csv 20120522
NFIRegulome pazar_NFIRegulome_20120522.csv 20120522
NRF2 pazar_NRF2_20120522.csv 20120522
NRSF_Johnson pazar_NRSF_Johnson_20120522.csv 20120522
Nr5a2_Heng pazar_Nr5a2_Heng_20120522.csv 20120522
ORegAnno pazar_ORegAnno_20120522.csv 20120522
ORegAnno_ENCODEprom pazar_ORegAnno_ENCODEprom_20120522.csv 20120522
ORegAnno_Erythroid pazar_ORegAnno_Erythroid_20120522.csv 20120522
ORegAnno_STAT1_ChIP pazar_ORegAnno_STAT1_ChIP_20120522.csv 20120522
ORegAnno_STAT1_lit pazar_ORegAnno_STAT1_lit_20120522.csv 20120522
Olf_Ebf_TFBS pazar_Olf_Ebf_TFBS_20120522.csv 20120522
Ortiz_Barahona pazar_Ortiz_Barahona_20120522.csv 20120522
P130_Chicas_quiescent pazar_P130_Chicas_quiescent_20120522.csv 20120522
P130_Chicas_quiescent_shRb pazar_P130_Chicas_quiescent_shRb_20120522.csv 20120522
P130_Chicas_senescent pazar_P130_Chicas_senescent_20120522.csv 20120522
P130_Chicas_senescent_shRb pazar_P130_Chicas_senescent_shRb_20120522.csv 20120522
PCL2_Walker pazar_PCL2_Walker_20120522.csv 20120522
PRDM14_Chia pazar_PRDM14_Chia_20120522.csv 20120522
Pax6_Sansom pazar_Pax6_Sansom_20120522.csv 20120522
Pax6_elements pazar_Pax6_elements_20120601.csv 20120601
Pluripotency pazar_Pluripotency_20120522.csv 20120522
RARE pazar_RARE_20120522.csv 20120522
RB_Chicas_growing pazar_RB_Chicas_growing_20120522.csv 20120522
RB_Chicas_quiescent pazar_RB_Chicas_quiescent_20120522.csv 20120522
RB_Chicas_senescent pazar_RB_Chicas_senescent_20120522.csv 20120522
RUNX1_Hollenhorst pazar_RUNX1_Hollenhorst_20120522.csv 20120522
Rad21_Schmidt pazar_Rad21_Schmidt_20120522.csv 20120522
Rap1_Martinez pazar_Rap1_Martinez_20120522.csv 20120522
STAG1_HEPG2_Schmidt pazar_STAG1_HEPG2_Schmidt_20120522.csv 20120522
STAT1_Robertson pazar_STAT1_Robertson_20121025.csv 20121025
STAT1_Rozowski pazar_STAT1_Rozowski_20120522.csv 20120522
Signaling_pathways_Chen pazar_Signaling_pathways_Chen_20120522.csv 20120522
Sox2_Fang pazar_Sox2_Fang_20120522.csv 20120522
Stat6_Kanai pazar_Stat6_Kanai_20120522.csv 20120522
Stat6_Kanai_BEAS2B pazar_Stat6_Kanai_BEAS2B_20120522.csv 20120522
Stat6_Kanai_Ramos pazar_Stat6_Kanai_Ramos_20120522.csv 20120522
Suz12_Peng pazar_Suz12_Peng_20120522.csv 20120522
TFe pazar_TFe_20120522.csv 20120522
TRIM28_ChIP pazar_TRIM28_ChIP_20120522.csv 20120522
Tal1_Cui pazar_Tal1_Cui_20120522.csv 20120522
Tbx3_Han pazar_Tbx3_Han_20120522.csv 20120522
Wasserman_Lab_Set pazar_Wasserman_Lab_Set_20120522.csv 20120522
liver_set pazar_liver_set_20120522.csv 20120522
muscle_set pazar_muscle_set_20120522.csv 20120522
p53_Eto_Smeenk pazar_p53_Eto_Smeenk_20120522.csv 20120522
p53_Smeenk pazar_p53_Smeenk_20120522.csv 20120522
pleiades_genes pazar_pleiades_genes_20120522.csv 20120522
znf263_Frietze pazar_znf263_Frietze_20120522.csv 20120522