STAT1 literature-derived Binding Sites.
A set of transcription factor binding sites for STAT1, extracted from the ORegAnno database. These sites were collected from the scientific literature to serve as positive controls in support of the experimental determination of STAT1 binding sites by ChIP-TS (chromatin immunoprecipitation with tag sequencing by the Illumina 1G system, Bentley DR 2006, PMID: 17055251).
Robertson G, Hirst M, Bainbridge M, Bilenky M, Zhao Y, Zeng T, Pandoh P, Fichter K, Tam A, Ma K, Prabhu AL, Moksa M, Lee S, Mah D, Sa D, McDonald H, Delaney A, Theissen N, Bernier B, Griffith O, He A, Varhol R, Euskirchen G, Snyder M, Marra M and Jones SJM. (2007) Genome-wide profiles of STAT1 DNA association in HeLa S3 cells using chromatin immunoprecipitation and massively parallel sequencing. Nat Methods. [Epub ahead of print]
Regulated genes (or markers): 28
Regulatory sequences (genomic): 37
Regulatory sequences (artificial): 0
Transcription factors: 1
Transcription factor profiles: 0
Annotated publications: 29
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