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The STAT1_Rozowski project in PAZAR
DescriptionChromatin immunoprecipitation (ChIP) followed by tag sequencing (ChIP-seq) using high-throughput next-generation instrumentation is fast, replacing chromatin immunoprecipitation followed by genome tiling array analysis (ChIP-chip) as the preferred approach for mapping of sites of transcription-factor binding and chromatin modification. Using two deeply sequenced data sets for human RNA polymerase II and STAT1, each with matching input-DNA controls, we describe a general scoring approach to address unique challenges in ChIP-seq data analysis.
Statistics
Regulated genes (or markers): 13082
Regulatory sequences (genomic): 36902 Regulatory sequences (artificial): 0 Transcription factors: 1 Transcription factor profiles: 0 Annotated publications: 1 Generate GFFIf you would like to generate a current GFF file for this project immediately, click the button below to do so. The file will be made available for download in a new window. The new window may be safely closed once you have downloaded the file. Note that GFF file generation may take a significant amount of time for larger projects.Pre-generated GFF files are available in the downloads section. Public projects are checked weekly and updated files are generated if there are changes. Access project data |