The TAL1 project in PAZAR Help

Description

pmid: 21241896

Statistics

Regulated genes (or markers): 67
Regulatory sequences (genomic): 67
Regulatory sequences (artificial): 0
Transcription factors: 1
Transcription factor profiles: 0
Annotated publications: 1

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Homo sapiens
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chromosome
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adenosine kinase ENSG00000156110
alanyl aminopeptidase ENSG00000166825
ankyrin repeat domain 55 ENSG00000164512
ArfGAP with FG repeats 1 ENSG00000173744
ATG9 autophagy related 9 homolog A ENSG00000198925
BCL2/adenovirus E1B 19kDa interacting protein 3-like ENSG00000104765
breast cancer anti-estrogen resistance 3 ENSG00000137936
C1D nuclear receptor corepressor ENSG00000197223
calmodulin 2 ENSG00000143933
CD226 molecule ENSG00000150637
CD69 molecule ENSG00000110848
cell division cycle 27 homolog ENSG00000004897
chromosome 1 open reading frame 38 ENSG00000130775
coiled-coil domain containing 28A ENSG00000024862
core-binding factor, runt domain, alpha subunit 2; translocated to, 3 ENSG00000129993
cyclin D3 ENSG00000112576
DCP1 decapping enzyme homolog A ENSG00000162290
dishevelled associated activator of morphogenesis 1 ENSG00000100592
engulfment and cell motility 1 ENSG00000155849
ets variant 5 ENSG00000244405
fms-related tyrosine kinase 1 ENSG00000102755
gephyrin ENSG00000171723
golgi glycoprotein 1 ENSG00000090863
guanine nucleotide binding protein alpha 12 ENSG00000146535
guanine nucleotide binding protein , gamma 12 ENSG00000172380
hematopoietically expressed homeobox ENSG00000152804
inositol 1,4,5-trisphosphate receptor, type 1 ENSG00000150995
interleukin 21 receptor ENSG00000103522
IQ motif containing GTPase activating protein 2 ENSG00000145703
jumonji, AT rich interactive domain 2 ENSG00000008083
kinesin family member 5C ENSG00000168280
leucine zipper transcription factor-like 1 ENSG00000163818
LIM and senescent cell antigen-like domains 1 ENSG00000169756
LIM domain containing preferred translocation partner in lipoma ENSG00000145012
lymphoblastic leukemia derived sequence 1 ENSG00000104903
mannosidase, alpha, class 2A, member 2 ENSG00000196547
mitogen-activated protein kinase 14 ENSG00000112062
mitogen-activated protein kinase kinase 5 ENSG00000137764
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 ENSG00000131196
phosphoinositide-3-kinase, class 2, beta polypeptide ENSG00000133056
phospholipase A2, group VI ENSG00000184381
pituitary tumor-transforming 1 interacting protein ENSG00000183255
polyamine-modulated factor 1 ENSG00000160783
proline rich 5 ENSG00000186654
protein tyrosine phosphatase, receptor type, D ENSG00000153707
regulator of G-protein signaling 10 ENSG00000148908
ribosomal protein S6 kinase, 90kDa, polypeptide 2 ENSG00000071242
runt-related transcription factor 1 ENSG00000159216
secretory carrier membrane protein 2 ENSG00000140497
SH2B adaptor protein 3 ENSG00000111252
SH3 domain and tetratricopeptide repeats 1 ENSG00000249762
signal transducing adaptor molecule 1 ENSG00000136738
SIK family kinase 3 ENSG00000160584
SMAD family member 3 ENSG00000166949
solute carrier family 1 , member 3 ENSG00000079215
solute carrier family 1 , member 5 ENSG00000105281
solute carrier organic anion transporter family, member 5A1 ENSG00000137571
spermine oxidase ENSG00000088826
tescalcin ENSG00000088992
transmembrane protein 129 ENSG00000168936
tropomyosin 4 ENSG00000167460
ubiquitin specific peptidase 20 ENSG00000136878
v-ets erythroblastosis virus E26 oncogene homolog 1 ENSG00000134954
vacuolar protein sorting 13 homolog B ENSG00000132549
zinc finger, DHHC-type containing 14 ENSG00000175048
zinc finger, MYND-type containing 8 ENSG00000101040
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TAL1_HUMAN ENST00000371884
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ADMC
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15688014
COMPILED
COMPUTATIONAL PREDICTION
DNASE I FOOTPRINTING
ELECTROPHORETIC MOBILITY SHIFT ASSAY (EMSA)::DIRECT GEL SHIFT
ELECTROPHORETIC MOBILITY SHIFT ASSAY (EMSA)::DIRECT GEL SHIFT WITH WESTERN BLOT DETECTION
ELECTROPHORETIC MOBILITY SHIFT ASSAY (EMSA)::GEL SHIFT COMPETITION
ELECTROPHORETIC MOBILITY SHIFT ASSAY (EMSA)::SUPERSHIFT
ELECTROPHORETIC MOBILITY SHIFT ASSAY (EMSA)::UNKNOWN
EMSA
EXPERT CURATED::LITERATURE DERIVED
GENE CO-EXPRESSION::CO-EXPRESSED GENES DETERMINED THROUGH REPORTER GENE EXPERIMENTS
IN-VIVO HUMAN CD4 ASSAY
MUTAGENESIS::EXONUCLEASE DIGESTION
MUTAGENESIS::EXONUCLEASE III DIGESTION
MUTAGENESIS::OLIGONUCLEOTIDE SYNTHESIS
MUTAGENESIS::PCR
MUTAGENESIS::RESTRICTION ENDONUCLEASE DIGESTION
MUTAGENESIS::SITE-DIRECTED
MUTAGENESIS::UNKNOWN
N/A
NA
PROTEIN BINDING ASSAY :: CHROMATIN IMMUNOPRECIPITATION WITH TAG SEQUENCING (CHIP-TS)
PROTEIN BINDING ASSAY::CHROMATIN IMMUNOPRECIPITATION (CHIP)
PROTEIN BINDING ASSAY::CHROMATIN IMMUNOPRECIPITATION WITH TAG SEQUENCING (CHIP-TS)
PROTEIN BINDING ASSAY::DNA-PROTEIN PRECIPITATION ASSAY
PROTEIN BINDING ASSAY::DNA-PROTEIN PRECIPITATION ASSAY WITH ELISA DETECTION
PROTEIN BINDING ASSAY::DNASE FOOTPRINTING ASSAY
PROTEIN BINDING ASSAY::DNASE FOOTPRINTING COMPETITION ASSAY
PROTEIN BINDING ASSAY::IN-VIVO FOOTPRINTING ASSAY
PROTEIN BINDING ASSAY::METHYLATION INTERFERENCE
PROTEIN BINDING ASSAY::METHYLATION INTERFERENCE ASSAY
PROTEIN BINDING ASSAY::UNKNOWN
PROTEIN BINDING ASSAY::WESTERN BLOT ASSAY
PROTEIN BINDING ASSAY::YEAST 1-HYBRID ASSAY
PROTEIN EXPRESSION ASSAY::ENZYME-LINKED IMMUNOSORBENT ASSAY (ELISA)
PROTEIN EXPRESSION ASSAY::INDIRECT IMMUNOFLUORESCENCE
PROTEIN EXPRESSION ASSAY::LUCIFERASE EXPRESSION ASSAY
PROTEIN EXPRESSION ASSAY::WESTERN BLOT ASSAY
REPORTER GENE ASSAY
REPORTER GENE ASSAY:: TRANSIENT TRANSFECTION GENE EXPRESSION ASSAY
REPORTER GENE ASSAY:: TRANSIENT TRANSFECTION GENE EXPRESSION ASSAY WITH ELISA DETECTION
REPORTER GENE ASSAY::BETA-GLOBIN EXPRESSION ASSAY
REPORTER GENE ASSAY::CHLORAMPHENICOL ACETYLTRANSFERASE (CAT) ASSAY
REPORTER GENE ASSAY::DUAL LUCIFERASE REPORTER GENE ASSAY
REPORTER GENE ASSAY::IN-VITRO VIRUS REPLICATION ASSAY
REPORTER GENE ASSAY::IN-VIVO CHLORAMPHENICOL ACETYLTRANSFERASE (CAT) ASSAY
REPORTER GENE ASSAY::IN-VIVO GENE EXPRESSION ASSAY
REPORTER GENE ASSAY::IN-VIVO GFP EXPRESSION ASSAY
REPORTER GENE ASSAY::IN-VIVO LACZ EXPRESSION ASSAY
REPORTER GENE ASSAY::IN-VIVO LUCIFERASE EXPRESSION ASSAY
REPORTER GENE ASSAY::RABBIT BETA-GLOBIN EXPRESSION ASSAY
REPORTER GENE ASSAY::SECRETED ALKALINE PHOSPHATASE (SEAP) ASSAY
REPORTER GENE ASSAY::SITE-SPECIFIC STABLE TRANSFECTION GFP ASSAY BY CRE-LOX RECOMBINATION
REPORTER GENE ASSAY::STABLE TRANSFECTION CAT ASSAY
REPORTER GENE ASSAY::STABLE TRANSFECTION DSRED ASSAY
REPORTER GENE ASSAY::STABLE TRANSFECTION LACZ ASSAY
REPORTER GENE ASSAY::STABLE TRANSFECTION LUCIFERASE ASSAY
REPORTER GENE ASSAY::STABLY INCORPORATED GFP TRANSGENE ASSAY
REPORTER GENE ASSAY::TARGETED IN-VIVO EXPRESSION ASSAY BY IN UTERO ELECTROPORATION
REPORTER GENE ASSAY::TARGETED IN-VIVO GENE EXPRESSION ASSAY BY NON-VIRAL INJECTION
REPORTER GENE ASSAY::TARGETED IN-VIVO GFP EXPRESSION ASSAY BY VIRAL INJECTION
REPORTER GENE ASSAY::TARGETED IN-VIVO LACZ EXPRESSION ASSAY BY VIRAL INJECTION
REPORTER GENE ASSAY::TRANSIENT TRANSFECTION GENE EXPRESSION ASSAY
REPORTER GENE ASSAY::TRANSIENT TRANSFECTION GFP ASSAY
REPORTER GENE ASSAY::TRANSIENT TRANSFECTION HUMAN GROWTH HORMONE ASSAY
REPORTER GENE ASSAY::TRANSIENT TRANSFECTION LACZ ASSAY
REPORTER GENE ASSAY::TRANSIENT TRANSFECTION LUCIFERASE ASSAY
REPORTER GENE ASSAY::UNKNOWN
REPORTER GENE ASSAY::VIRAL INFECTION LUCIFERASE ASSAY
RNA EXPRESSION ASSAY::IN-VITRO TRANSCRIPTION ASSAY WITH DETECTION BY PRIMER EXTENSION
RNA EXPRESSION ASSAY::NORTHERN BLOT
RNA EXPRESSION ASSAY::PRIMER EXTENSION ANALYSIS WITH POLY(A)+ RNA
RNA EXPRESSION ASSAY::REAL TIME PCR
RNA EXPRESSION ASSAY::REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION (RT-PCR)
RNA EXPRESSION ASSAY::RNASE PROTECTION ASSAY (RPA)
RNA EXPRESSION ASSAY::WHOLE-MOUNT IN SITU HYBRIDIZATION
RNA STABILITY ASSAY::RNA SYNTHESIS BLOCKING
SELEX
SEQUENCE CONSERVATION::CO-EXPRESSED GENE CONSERVATION
SEQUENCE CONSERVATION::CONSERVATION FOUND BY ALIGNMENT
SEQUENCE CONSERVATION::ORTHOLOGOUS GENE CONSERVATION
SITE-DIRECTED MUTAGENESIS
UNKNOWN::CHROMATIN IMMUNOPRECIPITATION (CHIP)
UNKNOWN::UNKNOWN
YEAST ONE-HYBRID
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